They opted from the start to house athletes in temporary accommodation in a bid to cut costs, ranging from a cruise liner and wooden containers to hotel rooms.
Organizers say that the 20th edition of the Games, which were first held in 1951, will be “the most spectacular for generations.”
Between 4,000 and 5,000 athletes and officials will stay on the Italian cruise ship Costa Serena, which usually features 571 cabins, seven swimming pools, eight restaurants and nine bars.
Cruise ships have been used previously as accommodation at international sporting events, but never on this scale.
The unusual accommodation plans have been met with concern by some countries, with India even building their own replica container huts to prepare athletes for their stay.
On Monday, South Korean sports officials branded the facilities as “the worst” accommodation ever at the Games and said the beds were too short.
With just days to go, a Korean Olympic committee official also told AFP that there was “a serious shortage of accommodation.”
Organizers are adamant that everyone will have a bed and confident that the typhoon season that usually visits Japan in September and October will not dampen the party.
Weather has already disrupted preparations, with record rainfall forcing athletes to evacuate their accommodation briefly last week.